Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_23795 | Not Available | Positive | 4660008 - 4660202 | 7212.65 |
| type iv secretion system protein | D9K54_23800 | Not Available | Positive | 4660206 - 4661201 | 35490.4 |
| conjugal transfer protein trbj | D9K54_23805 | Not Available | Positive | 4661207 - 4661851 | 24283.7 |
| hypothetical protein | D9K54_23810 | Not Available | Positive | 4661860 - 4662084 | 8406.04 |
| dna primase | D9K54_23815 | Not Available | Negative | 4662307 - 4663020 | 28486.8 |
| conjugal transfer protein | D9K54_23820 | Not Available | Positive | 4663164 - 4663463 | 10487.8 |
| pilus assembly protein | D9K54_23825 | Not Available | Positive | 4663466 - 4664701 | 45593.0 |
| pilus assembly protein pilm | D9K54_23830 | Not Available | Positive | 4664707 - 4665144 | 16423.9 |
| hypothetical protein | D9K54_23835 | Not Available | Positive | 4665263 - 4665484 | 8611.48 |
| is1 family transposase | D9K54_23840 | Not Available | Positive | 4665529 - 4665646 | 4500.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





