Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ia dna topoisomerase | D9K54_23590 | Not Available | Positive | 4629792 - 4631957 | 80131.7 |
| hemolysin expression modulator hha | D9K54_23595 | Not Available | Positive | 4632026 - 4632232 | 8058.68 |
| hypothetical protein | D9K54_23600 | Not Available | Positive | 4632378 - 4632581 | 7822.17 |
| pap2 family protein | D9K54_23605 | Not Available | Negative | 4632977 - 4633774 | 29560.3 |
| phosphoethanolamine--lipid a transferase mcr-1.1 | D9K54_23610 | Not Available | Negative | 4633822 - 4635447 | 60127.4 |
| relaxase | D9K54_23615 | Not Available | Negative | 4635668 - 4639981 | 164658.0 |
| plasmid mobilization relaxosome protein mobc | D9K54_23620 | Not Available | Negative | 4639978 - 4640319 | 13148.0 |
| zinc transporter | D9K54_23625 | Not Available | Positive | 4640687 - 4641088 | 15430.3 |
| conjugal transfer protein tral | D9K54_23630 | Not Available | Positive | 4641106 - 4641858 | 28123.7 |
| hypothetical protein | D9K54_23635 | Not Available | Positive | 4641836 - 4642567 | 27739.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





