Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbc | D9K54_23540 | Not Available | Positive | 4621058 - 4622232 | 44552.7 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | D9K54_23545 | Not Available | Positive | 4622233 - 4622618 | 13141.3 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | D9K54_23550 | Not Available | Negative | 4622628 - 4623944 | 46492.4 |
| shufflon protein c' | D9K54_23555 | Not Available | Positive | 4624400 - 4624597 | 7142.49 |
| shufflon protein c | D9K54_23560 | Not Available | Negative | 4624594 - 4624881 | 10439.2 |
| site-specific integrase | D9K54_23565 | Not Available | Positive | 4624920 - 4626044 | 43068.3 |
| hypothetical protein | D9K54_23570 | Not Available | Positive | 4626284 - 4626709 | 15979.4 |
| hypothetical protein | D9K54_23575 | Not Available | Positive | 4626756 - 4627271 | 19505.6 |
| hypothetical protein | D9K54_23580 | Not Available | Positive | 4627366 - 4629042 | 66248.6 |
| dna topoisomerase iii | D9K54_23585 | Not Available | Positive | 4629212 - 4629787 | 21717.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





