Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein | D9K54_23330 | Not Available | Negative | 4585604 - 4585858 | 10073.1 |
| hypothetical protein | D9K54_23335 | Not Available | Positive | 4585740 - 4586039 | 10270.2 |
| hypothetical protein | D9K54_23340 | Not Available | Negative | 4586020 - 4586604 | 20758.8 |
| hypothetical protein | D9K54_23350 | Not Available | Negative | 4586904 - 4587485 | 22441.8 |
| conjugal transfer protein trac | D9K54_23355 | Not Available | Negative | 4587499 - 4587719 | 8274.89 |
| conjugal transfer protein trac | D9K54_23360 | Not Available | Negative | 4587720 - 4588177 | 17267.8 |
| integrase | D9K54_23370 | Not Available | Positive | 4588611 - 4589621 | 38513.4 |
| conjugal transfer protein trae | D9K54_23375 | Not Available | Positive | 4589772 - 4590596 | 30928.5 |
| conjugal transfer protein traf | D9K54_23380 | Not Available | Positive | 4590682 - 4591884 | 43201.9 |
| hypothetical protein | D9K54_23385 | Not Available | Positive | 4592591 - 4592779 | 7060.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





