Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_23210 | Not Available | Positive | 4569211 - 4569393 | 6791.36 |
| major pilus subunit operon regulatory protein papb | D9K54_23215 | Not Available | Positive | 4569380 - 4569694 | 11696.2 |
| hypothetical protein | D9K54_23235 | Not Available | Negative | 4571499 - 4571621 | 4775.4 |
| hypothetical protein | D9K54_23240 | Not Available | Positive | 4571702 - 4571971 | 9533.66 |
| duf1281 domain-containing protein | D9K54_23245 | Not Available | Positive | 4572009 - 4572911 | 33906.7 |
| hypothetical protein | D9K54_23255 | Not Available | Positive | 4573296 - 4573576 | 10596.8 |
| hypothetical protein | D9K54_23260 | Not Available | Positive | 4573691 - 4573930 | 8319.49 |
| shufflon protein c | D9K54_23265 | Not Available | Negative | 4573943 - 4574260 | 11360.9 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | D9K54_23270 | Not Available | Negative | 4574294 - 4575556 | 43703.1 |
| peptidase | D9K54_23275 | Not Available | Negative | 4575565 - 4575908 | 12257.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





