Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_23055 | Not Available | Positive | 4548303 - 4548497 | 7505.54 |
| inovirus gp2 family protein | D9K54_23060 | Not Available | Positive | 4548541 - 4549272 | 27782.3 |
| duf3987 domain-containing protein | D9K54_23070 | Not Available | Positive | 4550457 - 4552061 | 61938.2 |
| inovirus gp2 family protein | D9K54_23075 | Not Available | Positive | 4553658 - 4554224 | 22491.7 |
| hypothetical protein | D9K54_23080 | Not Available | Positive | 4554508 - 4555080 | 22083.3 |
| alpa family transcriptional regulator | D9K54_23085 | Not Available | Positive | 4555149 - 4555385 | 9085.87 |
| hypothetical protein | D9K54_23090 | Not Available | Positive | 4555654 - 4556202 | 20351.5 |
| osmoprotectant transport activator proq | D9K54_23100 | Not Available | Negative | 4556538 - 4556729 | 7160.56 |
| hypothetical protein | D9K54_23125 | Not Available | Negative | 4558639 - 4558836 | 7795.34 |
| sulfonamide-resistant dihydropteroate synthase sul2 | D9K54_23140 | Not Available | Positive | 4560093 - 4560908 | 28471.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





