Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf987 domain-containing protein | D9K54_23005 | Not Available | Negative | 4540758 - 4540979 | 8409.23 |
| dna repair protein radc | D9K54_23010 | Not Available | Negative | 4541048 - 4541524 | 17683.4 |
| antirestriction protein | D9K54_23015 | Not Available | Negative | 4541540 - 4542025 | 18225.4 |
| duf945 domain-containing protein | D9K54_23020 | Not Available | Negative | 4542117 - 4542935 | 31176.4 |
| duf905 domain-containing protein | D9K54_23025 | Not Available | Negative | 4543026 - 4543235 | 8036.43 |
| hypothetical protein | D9K54_23030 | Not Available | Negative | 4543265 - 4543942 | 24356.1 |
| gtpase | D9K54_23035 | Not Available | Negative | 4544061 - 4544945 | 33125.9 |
| hypothetical protein | D9K54_23040 | Not Available | Positive | 4545052 - 4545984 | 36360.7 |
| hypothetical protein | D9K54_23045 | Not Available | Negative | 4545981 - 4546790 | 31890.4 |
| hypothetical protein | D9K54_23050 | Not Available | Positive | 4547969 - 4548205 | 9073.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





