Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide permease d | D9K54_22940 | Not Available | Positive | 4529260 - 4530741 | 54134.1 |
| deoxyribodipyrimidine photo-lyase | D9K54_22945 | Not Available | Negative | 4530891 - 4532309 | 53615.8 |
| duf1722 domain-containing protein | D9K54_22950 | Not Available | Negative | 4532306 - 4532815 | 20271.5 |
| hypothetical protein | D9K54_22955 | Not Available | Negative | 4532989 - 4533246 | 9621.8 |
| isas1 family transposase | D9K54_22960 | Not Available | Negative | 4533259 - 4534395 | 43149.9 |
| hypothetical protein | D9K54_22965 | Not Available | Positive | 4534543 - 4534821 | 10231.6 |
| hypothetical protein | D9K54_22970 | Not Available | Negative | 4535034 - 4535234 | 7583.2 |
| hypothetical protein | D9K54_22975 | Not Available | Negative | 4535505 - 4536074 | 21950.5 |
| rhs repeat protein | D9K54_22980 | Not Available | Negative | 4536071 - 4539562 | 133069.0 |
| type iv toxin-antitoxin system yeeu family antitoxin | D9K54_23000 | Not Available | Negative | 4540304 - 4540678 | 13730.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





