Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein | D9K54_22890 | Not Available | Positive | 4519019 - 4519585 | 19960.5 |
| fimbrial biogenesis outer membrane usher protein | D9K54_22895 | Not Available | Positive | 4519644 - 4522094 | 90134.2 |
| molecular chaperone | D9K54_22900 | Not Available | Positive | 4522109 - 4522840 | 27516.3 |
| type 1 fimbrial protein | D9K54_22905 | Not Available | Positive | 4522837 - 4523898 | 39665.9 |
| protein abrb | D9K54_22910 | Not Available | Positive | 4524047 - 4525093 | 36918.2 |
| endonuclease viii | D9K54_22915 | Not Available | Negative | 4525090 - 4525881 | 29812.8 |
| 5-oxoprolinase subunit pxpa | D9K54_22920 | Not Available | Negative | 4525917 - 4526651 | 25929.0 |
| 5-oxoprolinase/urea amidolyase family protein | D9K54_22925 | Not Available | Negative | 4526641 - 4527573 | 34432.6 |
| 5-oxoprolinase subunit pxpb | D9K54_22930 | Not Available | Negative | 4527567 - 4528223 | 23948.0 |
| nif3-like dinuclear metal center hexameric protein | D9K54_22935 | Not Available | Negative | 4528246 - 4528989 | 26894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





