Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylaspartate mutase subunit e | D9K54_22790 | Not Available | Positive | 4496884 - 4498329 | 53137.7 |
| methylaspartate ammonia-lyase | D9K54_22795 | Not Available | Positive | 4498329 - 4499570 | 45584.7 |
| acyclic terpene utilization atua family protein | D9K54_22800 | Not Available | Positive | 4499574 - 4500944 | 49157.7 |
| duf4387 domain-containing protein | D9K54_22805 | Not Available | Positive | 4500941 - 4501258 | 11912.4 |
| dicarboxylate/amino acid:cation symporter | D9K54_22810 | Not Available | Positive | 4501419 - 4502699 | 45236.0 |
| class i fumarate hydratase | D9K54_22815 | Not Available | Positive | 4502807 - 4504459 | 60046.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | D9K54_22820 | Not Available | Positive | 4504469 - 4505071 | 22387.7 |
| lysr family transcriptional regulator | D9K54_22825 | Not Available | Negative | 4505105 - 4506010 | 34379.4 |
| histidine ammonia-lyase | D9K54_22830 | Not Available | Negative | 4506287 - 4506427 | 5099.17 |
| hypothetical protein | D9K54_22835 | Not Available | Positive | 4506387 - 4506572 | 6606.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





