Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| piln family type ivb pilus formation outer membrane protein | D9K54_22620 | Not Available | Negative | 4479122 - 4480741 | 57542.7 |
| pilm | D9K54_22625 | Not Available | Negative | 4480772 - 4481209 | 16233.4 |
| pilus assembly protein | D9K54_22630 | Not Available | Negative | 4481214 - 4482284 | 38749.4 |
| hypothetical protein | D9K54_22635 | Not Available | Positive | 4482406 - 4482801 | 15647.9 |
| hypothetical protein | D9K54_22640 | Not Available | Negative | 4482802 - 4483233 | 17133.6 |
| trac | D9K54_22650 | Not Available | Negative | 4483825 - 4484490 | 25045.0 |
| transcription termination factor nusg | D9K54_22655 | Not Available | Negative | 4484631 - 4485272 | 24625.9 |
| hypothetical protein | D9K54_22660 | Not Available | Positive | 4485542 - 4485790 | 9644.02 |
| positive regulator for repz translation | D9K54_22665 | Not Available | Positive | 4485898 - 4485987 | 3390.02 |
| incfii family plasmid replication initiator repa | D9K54_22670 | Not Available | Positive | 4485984 - 4486847 | 32963.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





