Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_22265 | Not Available | Positive | 4424312 - 4424506 | 7257.69 |
| xre family transcriptional regulator | D9K54_22270 | Not Available | Negative | 4424537 - 4424788 | 9909.82 |
| hypothetical protein | D9K54_22275 | Not Available | Positive | 4425029 - 4425244 | 7715.22 |
| hypothetical protein | D9K54_22280 | Not Available | Positive | 4425580 - 4425795 | 7669.16 |
| duf4942 domain-containing protein | D9K54_22285 | Not Available | Positive | 4425920 - 4426768 | 32199.6 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | D9K54_22290 | Not Available | Negative | 4426853 - 4427051 | 7229.45 |
| duf4942 domain-containing protein | D9K54_22295 | Not Available | Positive | 4427168 - 4428016 | 32192.5 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | D9K54_22300 | Not Available | Negative | 4428101 - 4428436 | 12424.7 |
| nika protein | D9K54_22305 | Not Available | Positive | 4428669 - 4429001 | 12731.3 |
| relaxase nikb | D9K54_22310 | Not Available | Positive | 4429013 - 4431733 | 105104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





