Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | D9K54_22165 | Not Available | Negative | 4412046 - 4413137 | 38386.1 |
| fimbrial biogenesis outer membrane usher protein | D9K54_22170 | Not Available | Negative | 4413149 - 4415683 | 94287.5 |
| fimbrial chaperone | D9K54_22175 | Not Available | Negative | 4415705 - 4416391 | 25880.0 |
| fimbrial protein | D9K54_22180 | Not Available | Negative | 4416494 - 4417096 | 20889.2 |
| class a beta-lactamase | D9K54_22185 | Not Available | Positive | 4417577 - 4418317 | 26497.6 |
| plasmid sos inhibition protein a | D9K54_22190 | Not Available | Positive | 4418318 - 4418983 | 25768.6 |
| hypothetical protein | D9K54_22195 | Not Available | Positive | 4418980 - 4419540 | 20926.2 |
| duf1472 domain-containing protein | D9K54_22200 | Not Available | Positive | 4419541 - 4419809 | 10331.1 |
| antirestriction protein arda | D9K54_22205 | Not Available | Positive | 4419730 - 4420211 | 18453.8 |
| antirestriction protein | D9K54_22210 | Not Available | Positive | 4420270 - 4420611 | 13185.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





