Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | D9K54_21960 | Not Available | Negative | 4368085 - 4369746 | 58970.9 |
| heat-shock protein ibpb | D9K54_21965 | Not Available | Negative | 4369942 - 4370370 | 16094.1 |
| heat-shock protein ibpa | D9K54_21970 | Not Available | Negative | 4370482 - 4370895 | 15774.6 |
| ycek/yidq family lipoprotein | D9K54_21975 | Not Available | Positive | 4371201 - 4371533 | 11812.3 |
| duf3748 domain-containing protein | D9K54_21980 | Not Available | Negative | 4371535 - 4372749 | 44874.5 |
| protein cbra | D9K54_21985 | Not Available | Positive | 4372850 - 4373914 | 40036.5 |
| hypothetical protein | D9K54_21990 | Not Available | Positive | 4374160 - 4374816 | 24215.0 |
| sugar phosphatase yida | D9K54_21995 | Not Available | Negative | 4374862 - 4375674 | 29722.8 |
| duf937 domain-containing protein | D9K54_22000 | Not Available | Negative | 4375789 - 4376196 | 14158.0 |
| dna gyrase subunit b | D9K54_22005 | Not Available | Negative | 4376427 - 4378841 | 89955.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





