Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide 3-alpha-galactosyltransferase | D9K54_21610 | Not Available | Negative | 4284618 - 4285634 | 38798.9 |
| lipopolysaccharide core heptose(i) kinase rfap | D9K54_21615 | Not Available | Negative | 4285650 - 4286447 | 31053.1 |
| glycosyltransferase family 1 protein | D9K54_21620 | Not Available | Negative | 4286440 - 4287564 | 42530.6 |
| lipopolysaccharide core heptosyltransferase rfaq | D9K54_21625 | Not Available | Negative | 4287561 - 4288619 | 39448.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | D9K54_21630 | Not Available | Positive | 4289032 - 4290309 | 47293.9 |
| pantetheine-phosphate adenylyltransferase | D9K54_21635 | Not Available | Positive | 4290317 - 4290796 | 17837.7 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | D9K54_21640 | Not Available | Negative | 4290835 - 4291644 | 30261.8 |
| 50s ribosomal protein l33 | D9K54_21645 | Not Available | Negative | 4291742 - 4291909 | 6371.94 |
| 50s ribosomal protein l28 | D9K54_21650 | Not Available | Negative | 4291930 - 4292166 | 9007.02 |
| jab domain-containing protein | D9K54_21655 | Not Available | Negative | 4292383 - 4293051 | 25275.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





