Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol-1-phosphate 5-dehydrogenase | D9K54_21455 | Not Available | Positive | 4253919 - 4255067 | 41157.5 |
| mltr family transcriptional regulator | D9K54_21460 | Not Available | Positive | 4255067 - 4255654 | 21976.5 |
| hypothetical protein | D9K54_21465 | Not Available | Negative | 4255666 - 4255875 | 7995.76 |
| yibl family ribosome-associated protein | D9K54_21470 | Not Available | Positive | 4256160 - 4256522 | 13683.8 |
| duf3251 domain-containing protein | D9K54_21475 | Not Available | Positive | 4257196 - 4257747 | 20516.8 |
| peptide abc transporter permease | D9K54_21485 | Not Available | Positive | 4259316 - 4261007 | 57033.2 |
| l-lactate permease | D9K54_21490 | Not Available | Positive | 4261435 - 4263090 | 59175.5 |
| transcriptional regulator lldr | D9K54_21495 | Not Available | Positive | 4263090 - 4263866 | 29167.9 |
| alpha-hydroxy-acid oxidizing enzyme | D9K54_21500 | Not Available | Positive | 4263863 - 4265053 | 42716.6 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | D9K54_21505 | Not Available | Positive | 4265208 - 4265681 | 17658.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





