Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 abc transporter substrate-binding protein | D9K54_21180 | Not Available | Negative | 4200910 - 4201896 | 35671.3 |
| asch domain-containing protein | D9K54_21185 | Not Available | Negative | 4202147 - 4202557 | 15151.1 |
| is1 family transposase | D9K54_21190 | Not Available | Negative | 4202729 - 4202846 | 4500.51 |
| antirestriction protein | D9K54_21200 | Not Available | Positive | 4203674 - 4203976 | 11534.7 |
| duf1380 domain-containing protein | D9K54_21205 | Not Available | Positive | 4204023 - 4204445 | 15670.6 |
| hypothetical protein | D9K54_21210 | Not Available | Positive | 4204442 - 4204633 | 7294.77 |
| hypothetical protein | D9K54_21220 | Not Available | Negative | 4204748 - 4204933 | 6489.8 |
| group ii intron reverse transcriptase/maturase | D9K54_21225 | Not Available | Negative | 4204911 - 4206578 | 64705.1 |
| single-stranded dna-binding protein | D9K54_21230 | Not Available | Positive | 4207538 - 4207683 | 5047.75 |
| is1 family transposase | D9K54_21235 | Not Available | Negative | 4207684 - 4207761 | 2485.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





