Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylisocitrate lyase | D9K54_21130 | Not Available | Negative | 4190685 - 4191575 | 32091.5 |
| propionate catabolism operon regulatory protein prpr | D9K54_21135 | Not Available | Positive | 4191814 - 4193400 | 58720.1 |
| duf1471 domain-containing protein | D9K54_21140 | Not Available | Negative | 4193498 - 4193773 | 9929.94 |
| hypothetical protein | D9K54_21145 | Not Available | Positive | 4193920 - 4194591 | 24853.9 |
| Trna-pseudo | Not Available | Not Available | Positive | 4194843 - 4194923 | Not Available |
| hypothetical protein | D9K54_21150 | Not Available | Negative | 4194608 - 4194853 | 8889.07 |
| nad(p)-dependent alcohol dehydrogenase | D9K54_21160 | Not Available | Negative | 4196324 - 4197373 | 37979.6 |
| abc transporter permease | D9K54_21165 | Not Available | Negative | 4197460 - 4198416 | 33769.8 |
| abc transporter permease | D9K54_21170 | Not Available | Negative | 4198413 - 4199384 | 34947.9 |
| sugar abc transporter atp-binding protein | D9K54_21175 | Not Available | Negative | 4199377 - 4200861 | 54471.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





