Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | D9K54_21030 | Not Available | Negative | 4165430 - 4166239 | 28875.5 |
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | D9K54_21035 | Not Available | Negative | 4166249 - 4167115 | 31913.2 |
| 3-carboxyethylcatechol 2,3-dioxygenase | D9K54_21040 | Not Available | Negative | 4167133 - 4168077 | 34198.9 |
| 3-(3-hydroxy-phenyl)propionate/3- hydroxycinnamic acid hydroxylase | D9K54_21045 | Not Available | Negative | 4168079 - 4169743 | 62156.3 |
| dna-binding transcriptional activator mhpr | D9K54_21050 | Not Available | Positive | 4169820 - 4170767 | 35538.3 |
| mbl fold metallo-hydrolase | D9K54_21055 | Not Available | Positive | 4170882 - 4171658 | 28598.1 |
| glxa family transcriptional regulator | D9K54_21060 | Not Available | Positive | 4171678 - 4172631 | 35645.9 |
| laci family dna-binding transcriptional regulator | D9K54_21065 | Not Available | Positive | 4172668 - 4173750 | 38561.5 |
| beta-galactosidase | D9K54_21070 | Not Available | Positive | 4173873 - 4176947 | 116357.0 |
| mfs transporter | D9K54_21075 | Not Available | Positive | 4176999 - 4178252 | 46505.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





