Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | D9K54_20980 | Not Available | Positive | 4154279 - 4155310 | 37370.5 |
| iron abc transporter permease | D9K54_20985 | Not Available | Positive | 4155379 - 4157457 | 75740.1 |
| ferric abc transporter atp-binding protein | D9K54_20990 | Not Available | Positive | 4157469 - 4158515 | 39102.0 |
| transcriptional regulator | D9K54_20995 | Not Available | Positive | 4158675 - 4158950 | 10318.3 |
| s-(hydroxymethyl)glutathione dehydrogenase | D9K54_21000 | Not Available | Positive | 4158985 - 4160094 | 39335.2 |
| s-formylglutathione hydrolase | D9K54_21005 | Not Available | Positive | 4160187 - 4161020 | 31273.9 |
| duf2058 domain-containing protein | D9K54_21010 | Not Available | Negative | 4161346 - 4161885 | 19939.9 |
| 3-(3-hydroxy-phenyl)propionate transporter | D9K54_21015 | Not Available | Negative | 4161987 - 4163198 | 41585.5 |
| 4-hydroxy-2-oxovalerate aldolase | D9K54_21020 | Not Available | Negative | 4163473 - 4164486 | 36440.6 |
| acetaldehyde dehydrogenase | D9K54_21025 | Not Available | Negative | 4164483 - 4165433 | 33444.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





