Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_20675 | Not Available | Positive | 4089717 - 4089905 | 7450.3 |
| exodeoxyribonuclease 7 small subunit | D9K54_20680 | Not Available | Positive | 4090011 - 4090253 | 8952.42 |
| farnesyl-diphosphate synthase | D9K54_20685 | Not Available | Positive | 4090253 - 4091152 | 32161.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | D9K54_20690 | Not Available | Positive | 4091177 - 4093039 | 67606.9 |
| aldo/keto reductase | D9K54_20695 | Not Available | Positive | 4093094 - 4094068 | 36421.3 |
| pentapeptide repeat-containing protein | D9K54_20700 | Not Available | Positive | 4094299 - 4095870 | 60783.0 |
| phosphatidylglycerophosphatase a | D9K54_20705 | Not Available | Negative | 4096047 - 4096562 | 19332.2 |
| thiamine-phosphate kinase | D9K54_20710 | Not Available | Negative | 4096540 - 4097517 | 35042.8 |
| n utilization substance protein b | D9K54_20715 | Not Available | Negative | 4097595 - 4098014 | 15689.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | D9K54_20720 | Not Available | Negative | 4098034 - 4098504 | 16157.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





