Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit ii | D9K54_20625 | Not Available | Positive | 4079744 - 4080691 | 34971.2 |
| cytochrome ubiquinol oxidase subunit i | D9K54_20630 | Not Available | Positive | 4080713 - 4082704 | 74372.2 |
| cytochrome bo(3) ubiquinol oxidase subunit 3 | D9K54_20635 | Not Available | Positive | 4082694 - 4083308 | 22624.0 |
| cytochrome bo(3) ubiquinol oxidase subunit 4 | D9K54_20640 | Not Available | Positive | 4083308 - 4083637 | 12030.2 |
| protoheme ix farnesyltransferase | D9K54_20645 | Not Available | Positive | 4083649 - 4084539 | 32250.4 |
| mfs transporter | D9K54_20650 | Not Available | Positive | 4084688 - 4086052 | 48782.9 |
| yajq family cyclic di-gmp-binding protein | D9K54_20655 | Not Available | Negative | 4086180 - 4086671 | 18344.9 |
| 2-dehydropantoate 2-reductase | D9K54_20660 | Not Available | Positive | 4086839 - 4087750 | 33872.8 |
| protein deglycase yajl | D9K54_20665 | Not Available | Positive | 4087713 - 4088303 | 20867.3 |
| trna 4-thiouridine(8) synthase thii | D9K54_20670 | Not Available | Negative | 4088357 - 4089805 | 55051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





