Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonia channel | D9K54_20525 | Not Available | Negative | 4057101 - 4058387 | 44517.4 |
| nitrogen regulatory protein p-ii 2 | D9K54_20530 | Not Available | Negative | 4058417 - 4058755 | 12259.9 |
| multidrug resistance-like atp-binding protein mdlb | D9K54_20535 | Not Available | Negative | 4058936 - 4060717 | 65272.6 |
| smda family multidrug abc transporter permease/atp-binding protein | D9K54_20540 | Not Available | Negative | 4060710 - 4062482 | 66062.4 |
| lrp/asnc family transcriptional regulator | D9K54_20545 | Not Available | Negative | 4062512 - 4062970 | 17438.4 |
| hmp-pp phosphatase | D9K54_20550 | Not Available | Negative | 4063123 - 4063941 | 30330.6 |
| sgrr family transcriptional regulator | D9K54_20555 | Not Available | Positive | 4064041 - 4065741 | 64927.2 |
| 7-cyano-7-deazaguanine synthase quec | D9K54_20560 | Not Available | Positive | 4065806 - 4066501 | 25481.5 |
| long-chain acyl-coa thioesterase fadm | D9K54_20565 | Not Available | Negative | 4066553 - 4066951 | 15089.2 |
| hypothetical protein | D9K54_20570 | Not Available | Negative | 4067045 - 4067416 | 12704.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





