Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate phosphoribosyltransferase | D9K54_00995 | Not Available | Positive | 202280 - 203482 | 45925.8 |
| asparagine--trna ligase | D9K54_01000 | Not Available | Positive | 203650 - 205050 | 52573.2 |
| porin ompf | D9K54_01005 | Not Available | Positive | 205652 - 206725 | 38676.7 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 206237 - 206352 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 206482 - 206597 | Not Available |
| aspartate aminotransferase | D9K54_01010 | Not Available | Positive | 206910 - 208100 | 43575.7 |
| mbl fold metallo-hydrolase | D9K54_01015 | Not Available | Negative | 208151 - 208798 | 23773.4 |
| duf882 domain-containing protein | D9K54_01020 | Not Available | Negative | 208825 - 209373 | 20355.6 |
| l,d-transpeptidase | D9K54_01025 | Not Available | Negative | 209554 - 211401 | 67828.3 |
| chromosome partition protein mukb | D9K54_01030 | Not Available | Negative | 211662 - 216122 | 170222.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





