Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | D9K54_20010 | Not Available | Positive | 3969056 - 3970510 | 54067.0 |
| yebc/pmpr family dna-binding transcriptional regulator | D9K54_20015 | Not Available | Positive | 3970852 - 3971568 | 25868.5 |
| Trna-asn | Not Available | Not Available | Positive | 3972022 - 3972097 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 3973859 - 3973934 | Not Available |
| hth-type transcriptional regulator cbl | D9K54_20035 | Not Available | Negative | 3973972 - 3974922 | 35883.1 |
| nitrogen assimilation transcriptional regulator | D9K54_20040 | Not Available | Negative | 3975024 - 3975941 | 32943.2 |
| Trna-asn | Not Available | Not Available | Positive | 3976267 - 3976342 | Not Available |
| l,d-transpeptidase | D9K54_20050 | Not Available | Negative | 3976398 - 3977333 | 34494.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | D9K54_20055 | Not Available | Negative | 3977395 - 3978474 | 36947.2 |
| adenosylcobinamide-gdp ribazoletransferase | D9K54_20060 | Not Available | Negative | 3978486 - 3979229 | 26417.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





