Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1380 domain-containing protein | D9K54_19755 | Not Available | Negative | 3932376 - 3932545 | 6542.68 |
| antirestriction protein | D9K54_19760 | Not Available | Negative | 3932592 - 3932894 | 11534.7 |
| duf1472 domain-containing protein | D9K54_19765 | Not Available | Negative | 3932990 - 3933278 | 10923.8 |
| rhs repeat protein | D9K54_19770 | Not Available | Positive | 3933279 - 3934170 | 33314.4 |
| Trna-ser | Not Available | Not Available | Positive | 3956825 - 3956914 | Not Available |
| protein mtfa | D9K54_19985 | Not Available | Positive | 3957008 - 3957805 | 30280.7 |
| Trna-asn | Not Available | Not Available | Positive | 3957906 - 3957981 | Not Available |
| inverse autotransporter adhesin-like protein yeej | D9K54_19995 | Not Available | Positive | 3958265 - 3965689 | 260742.0 |
| lipopolysaccharide heptosyltransferase family protein | D9K54_20000 | Not Available | Negative | 3966271 - 3967323 | 39540.6 |
| shikimate transporter | D9K54_20005 | Not Available | Positive | 3967638 - 3968954 | 47847.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





