Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase 2 | D9K54_19705 | Not Available | Negative | 3926149 - 3926460 | 10743.9 |
| anaerobic c4-dicarboxylate transporter | D9K54_19710 | Not Available | Negative | 3926948 - 3928282 | 47030.0 |
| hypothetical protein | D9K54_19715 | Not Available | Negative | 3928438 - 3928571 | 5092.02 |
| integrase | D9K54_19720 | Not Available | Negative | 3928572 - 3928795 | 8788.67 |
| ant(3'')-ia family aminoglycoside nucleotidyltransferase aada22 | D9K54_19725 | Not Available | Positive | 3928944 - 3929735 | 29435.1 |
| is1 family transposase | D9K54_19730 | Not Available | Negative | 3929903 - 3930019 | 4500.51 |
| parb/repb/spo0j family partition protein | D9K54_19735 | Not Available | Positive | 3930020 - 3930544 | 18848.3 |
| hypothetical protein | D9K54_19740 | Not Available | Positive | 3930545 - 3931625 | 39652.8 |
| conjugation system sos inhibitor psib | D9K54_19745 | Not Available | Positive | 3931680 - 3932114 | 15825.0 |
| hypothetical protein | D9K54_19750 | Not Available | Positive | 3932111 - 3932375 | 9979.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





