Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9K54_19640 | Not Available | Negative | 3915998 - 3916216 | 7422.04 |
| duf1281 domain-containing protein | D9K54_19645 | Not Available | Positive | 3916152 - 3917054 | 33850.5 |
| hypothetical protein | D9K54_19650 | Not Available | Positive | 3917058 - 3917363 | 11400.8 |
| dna methylase | D9K54_19655 | Not Available | Positive | 3917439 - 3918122 | 25537.6 |
| hypothetical protein | D9K54_19660 | Not Available | Positive | 3918123 - 3918344 | 8577.28 |
| duf1380 domain-containing protein | D9K54_19665 | Not Available | Positive | 3918358 - 3918792 | 16146.3 |
| hypothetical protein | D9K54_19670 | Not Available | Positive | 3918837 - 3919607 | 28641.4 |
| class a beta-lactamase | D9K54_19690 | Not Available | Positive | 3923114 - 3923854 | 26482.5 |
| two-component system response regulator dcur | D9K54_19695 | Not Available | Positive | 3924099 - 3924824 | 27941.2 |
| type ii asparaginase | D9K54_19700 | Not Available | Negative | 3925418 - 3926148 | 25984.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





