Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf905 domain-containing protein | D9K54_19580 | Not Available | Negative | 3910864 - 3911097 | 9034.56 |
| single-stranded dna-binding protein | D9K54_19585 | Not Available | Negative | 3911155 - 3911478 | 11704.6 |
| is6 family transposase | D9K54_19590 | Not Available | Positive | 3911479 - 3911558 | 2852.44 |
| restriction endonuclease | D9K54_19600 | Not Available | Positive | 3911961 - 3912742 | 29090.4 |
| restriction endonuclease | D9K54_19605 | Not Available | Positive | 3912743 - 3913163 | 15885.1 |
| dna cytosine methyltransferase | D9K54_19610 | Not Available | Negative | 3913197 - 3914630 | 54531.9 |
| is1 family transposase | D9K54_19620 | Not Available | Positive | 3915253 - 3915330 | 2485.91 |
| dini family protein | D9K54_19625 | Not Available | Negative | 3915331 - 3915445 | 4539.51 |
| hypothetical protein | D9K54_19630 | Not Available | Positive | 3915556 - 3915756 | 7363.01 |
| hypothetical protein | D9K54_19635 | Not Available | Positive | 3915746 - 3916057 | 11936.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





