Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulokinase | D9K54_19205 | Not Available | Negative | 3831316 - 3832785 | 54154.4 |
| hth-type transcriptional activator rhas | D9K54_19210 | Not Available | Positive | 3833073 - 3833909 | 32248.1 |
| hth-type transcriptional activator rhar | D9K54_19215 | Not Available | Positive | 3833893 - 3834831 | 35670.4 |
| l-rhamnose/proton symporter rhat | D9K54_19220 | Not Available | Negative | 3834828 - 3835862 | 37286.1 |
| superoxide dismutase | D9K54_19225 | Not Available | Positive | 3836147 - 3836767 | 23080.2 |
| 2-keto-3-deoxygluconate permease | D9K54_19230 | Not Available | Positive | 3837027 - 3838010 | 33671.4 |
| 6-n-hydroxylaminopurine resistance protein | D9K54_19235 | Not Available | Positive | 3838159 - 3838833 | 25344.1 |
| two-component sensor histidine kinase | D9K54_19240 | Not Available | Negative | 3838939 - 3840312 | 51627.3 |
| dna-binding response regulator | D9K54_19245 | Not Available | Negative | 3840309 - 3841007 | 26313.7 |
| periplasmic protein cpxp | D9K54_19250 | Not Available | Positive | 3841157 - 3841657 | 18966.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





