Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D9K54_19055 | Not Available | Negative | 3799636 - 3801021 | 50985.1 |
| alpha-glucosidase | D9K54_19060 | Not Available | Negative | 3801067 - 3803103 | 77264.9 |
| aldose-1-epimerase | D9K54_19065 | Not Available | Negative | 3803302 - 3804228 | 34018.8 |
| sulfoquinovose isomerase | D9K54_19070 | Not Available | Negative | 3804342 - 3805583 | 47435.0 |
| sulfofructosephosphate aldolase | D9K54_19075 | Not Available | Negative | 3805600 - 3806478 | 31984.9 |
| 3-sulfolactaldehyde reductase | D9K54_19080 | Not Available | Negative | 3806502 - 3807398 | 31176.1 |
| ribokinase | D9K54_19085 | Not Available | Positive | 3807566 - 3808462 | 31729.4 |
| deor/glpr transcriptional regulator | D9K54_19090 | Not Available | Positive | 3808496 - 3809281 | 28509.0 |
| alpha-d-glucose-1-phosphate phosphatase yihx | D9K54_19095 | Not Available | Positive | 3809380 - 3809979 | 22733.0 |
| virulence factor brkb family protein | D9K54_19100 | Not Available | Positive | 3809973 - 3810845 | 32840.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





