Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane integrity-associated transporter subunit pqia | D9K54_00900 | Not Available | Negative | 179381 - 180634 | 46466.2 |
| abc transporter atp-binding protein | D9K54_00905 | Not Available | Negative | 180764 - 182671 | 72125.1 |
| Ncrna_class:other | Not Available | Not Available | Positive | 184559 - 184690 | Not Available |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | D9K54_00910 | Not Available | Negative | 182683 - 184791 | 78856.6 |
| mosc domain-containing protein | D9K54_00915 | Not Available | Positive | 185035 - 186144 | 40634.6 |
| cell division protein zapc | D9K54_00920 | Not Available | Negative | 186141 - 186683 | 20566.8 |
| quinone-dependent dihydroorotate dehydrogenase | D9K54_00925 | Not Available | Negative | 186857 - 187867 | 36776.8 |
| fimbrial chaperone | D9K54_00930 | Not Available | Negative | 187978 - 188688 | 25814.3 |
| type 1 fimbrial protein | D9K54_00935 | Not Available | Negative | 188681 - 189196 | 18483.0 |
| fimbrial protein | D9K54_00940 | Not Available | Negative | 189204 - 189746 | 18914.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





