Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6 family transposase | D9K54_18785 | Not Available | Negative | 3753757 - 3753835 | 2852.44 |
| parb/repb/spo0j family partition protein | D9K54_18790 | Not Available | Negative | 3753836 - 3755466 | 59588.1 |
| is5-like element is903b family transposase | D9K54_18795 | Not Available | Negative | 3755586 - 3756310 | 27106.7 |
| tn3 family transposase | D9K54_18800 | Not Available | Negative | 3756345 - 3757647 | 48111.6 |
| hypothetical protein | D9K54_18805 | Not Available | Positive | 3757827 - 3758753 | 35725.2 |
| hypothetical protein | D9K54_18810 | Not Available | Positive | 3758798 - 3759052 | 8970.85 |
| abortive infection protein | D9K54_18815 | Not Available | Positive | 3759551 - 3759895 | 13037.5 |
| duf4238 domain-containing protein | D9K54_18820 | Not Available | Negative | 3760071 - 3761072 | 38527.5 |
| hypothetical protein | D9K54_18825 | Not Available | Positive | 3761584 - 3761829 | 9484.29 |
| hypothetical protein | D9K54_18830 | Not Available | Positive | 3761829 - 3762419 | 21484.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





