Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | D9K54_18400 | Not Available | Positive | 3689973 - 3691154 | 43263.9 |
| amino acid abc transporter permease | D9K54_18405 | Not Available | Positive | 3691164 - 3692267 | 41527.7 |
| amino acid abc transporter atp-binding protein | D9K54_18410 | Not Available | Positive | 3692275 - 3693033 | 28594.0 |
| Trna-thr | Not Available | Not Available | Positive | 3693420 - 3693495 | Not Available |
| is6 family transposase | D9K54_18440 | Not Available | Positive | 3694838 - 3694907 | 2965.68 |
| integrase | D9K54_18445 | Not Available | Positive | 3694909 - 3695373 | 17421.7 |
| duf3330 domain-containing protein | D9K54_18450 | Not Available | Positive | 3695342 - 3695595 | 8775.57 |
| protein impc | D9K54_18455 | Not Available | Positive | 3695615 - 3695863 | 9502.3 |
| peptidase | D9K54_18460 | Not Available | Positive | 3695860 - 3696297 | 16220.1 |
| translesion error-prone dna polymerase v subunit umuc | D9K54_18465 | Not Available | Positive | 3696351 - 3697105 | 28042.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





