Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mred | D9K54_18300 | Not Available | Negative | 3668225 - 3668713 | 18788.9 |
| rod shape-determining protein mrec | D9K54_18305 | Not Available | Negative | 3668713 - 3669816 | 39562.8 |
| rod shape-determining protein | D9K54_18310 | Not Available | Negative | 3669882 - 3670925 | 36954.7 |
| hypothetical protein | D9K54_18315 | Not Available | Positive | 3671033 - 3671221 | 7062.6 |
| rnase e specificity factor csrd | D9K54_18320 | Not Available | Negative | 3671230 - 3673170 | 73345.6 |
| acrylyl-coa reductase acui | D9K54_18325 | Not Available | Positive | 3673322 - 3674296 | 34739.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | D9K54_18330 | Not Available | Positive | 3675274 - 3675744 | 16688.2 |
| acetyl-coa carboxylase biotin carboxylase subunit | D9K54_18335 | Not Available | Positive | 3675755 - 3677104 | 49351.8 |
| duf997 family protein | D9K54_18340 | Not Available | Positive | 3677213 - 3677455 | 9108.28 |
| sodium:pantothenate symporter | D9K54_18345 | Not Available | Positive | 3677445 - 3678896 | 51720.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





