Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase small subunit | D9K54_18150 | Not Available | Positive | 3636344 - 3637762 | 52032.3 |
| duf1016 domain-containing protein | D9K54_18155 | Not Available | Positive | 3637946 - 3639073 | 43455.1 |
| yhch/yjgk/yial family protein | D9K54_18160 | Not Available | Negative | 3639133 - 3639597 | 17037.7 |
| rok family protein | D9K54_18165 | Not Available | Negative | 3639594 - 3640469 | 29637.7 |
| n-acetylmannosamine-6-phosphate 2-epimerase | D9K54_18170 | Not Available | Negative | 3640466 - 3641155 | 24190.3 |
| mfs transporter | D9K54_18175 | Not Available | Negative | 3641203 - 3642693 | 53584.4 |
| n-acetylneuraminate lyase | D9K54_18180 | Not Available | Negative | 3642802 - 3643695 | 32623.5 |
| transcriptional regulator nanr | D9K54_18185 | Not Available | Negative | 3643817 - 3644608 | 29496.0 |
| c4-dicarboxylate transporter dcuc | D9K54_18190 | Not Available | Positive | 3644988 - 3646355 | 48892.1 |
| stringent starvation protein b | D9K54_18195 | Not Available | Negative | 3646397 - 3646894 | 18233.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





