Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ygjj | D9K54_17490 | Not Available | Positive | 3503879 - 3504949 | 40078.5 |
| alpha-glucosidase | D9K54_17495 | Not Available | Positive | 3504966 - 3507317 | 88408.8 |
| nadph-dependent 2,4-dienoyl-coa reductase | D9K54_17500 | Not Available | Positive | 3507643 - 3509661 | 72751.8 |
| ribosomal rna large subunit methyltransferase g | D9K54_17505 | Not Available | Negative | 3509772 - 3510908 | 42288.8 |
| m48 family peptidase | D9K54_17510 | Not Available | Positive | 3510993 - 3511496 | 19456.6 |
| vancomycin high temperature exclusion protein | D9K54_17515 | Not Available | Positive | 3511573 - 3512265 | 25584.4 |
| gfo/idh/moca family oxidoreductase | D9K54_17520 | Not Available | Positive | 3512344 - 3513330 | 36217.2 |
| terc family membrane protein alx | D9K54_17525 | Not Available | Positive | 3513613 - 3514578 | 35983.1 |
| serine/threonine transporter sstt | D9K54_17530 | Not Available | Positive | 3515194 - 3516438 | 43480.4 |
| ygjv family protein | D9K54_17535 | Not Available | Negative | 3516443 - 3516994 | 20590.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





