Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | D9K54_17190 | Not Available | Negative | 3450041 - 3450625 | 21465.1 |
| is1 family transposase | D9K54_17200 | Not Available | Negative | 3451048 - 3451125 | 2485.91 |
| is3 family transposase | D9K54_17210 | Not Available | Negative | 3451598 - 3452811 | 46264.1 |
| transposase | D9K54_17215 | Not Available | Positive | 3452971 - 3453153 | 7146.51 |
| hypothetical protein | D9K54_17220 | Not Available | Positive | 3453303 - 3453566 | 10185.7 |
| outer membrane protease | D9K54_17225 | Not Available | Negative | 3453933 - 3454322 | 14300.2 |
| omptin family outer membrane protease | D9K54_17230 | Not Available | Positive | 3454426 - 3455379 | 35635.3 |
| hypothetical protein | D9K54_17235 | Not Available | Negative | 3455469 - 3455753 | 11023.8 |
| nad(p)h-binding protein | D9K54_17240 | Not Available | Positive | 3455812 - 3456921 | 41024.3 |
| antimicrobial resistance protein mig-14 | D9K54_17245 | Not Available | Positive | 3456984 - 3457892 | 35303.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





