Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | D9K54_17085 | Not Available | Positive | 3430591 - 3431439 | 30861.8 |
| hypothetical protein | D9K54_17090 | Not Available | Positive | 3431556 - 3432038 | 18573.4 |
| prepilin peptidase | D9K54_17100 | Not Available | Negative | 3432632 - 3433267 | 23733.0 |
| lytic transglycosylase | D9K54_17105 | Not Available | Negative | 3433271 - 3433753 | 18159.2 |
| hypothetical protein | D9K54_17110 | Not Available | Negative | 3433819 - 3434382 | 20094.8 |
| type ii secretion protein f | D9K54_17115 | Not Available | Negative | 3434432 - 3435541 | 41831.3 |
| type ii secretion protein e | D9K54_17120 | Not Available | Negative | 3435532 - 3437070 | 57375.3 |
| type iv pilus biogenesis protein pilp | D9K54_17125 | Not Available | Negative | 3437095 - 3437589 | 17634.2 |
| pilin accessory family protein | D9K54_17130 | Not Available | Negative | 3437573 - 3438895 | 49834.3 |
| piln family type ivb pilus formation outer membrane protein | D9K54_17135 | Not Available | Negative | 3438934 - 3440577 | 58039.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





