Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenocysteinyl-trna-specific translation elongation factor selb | D9K54_17010 | Not Available | Negative | 3415252 - 3417096 | 68826.4 |
| l-seryl-trna(sec) selenium transferase | D9K54_17015 | Not Available | Negative | 3417093 - 3418484 | 50698.4 |
| glutathione s-transferase | D9K54_17020 | Not Available | Negative | 3418582 - 3419190 | 22546.3 |
| type iv secretion protein rhs | D9K54_17025 | Not Available | Positive | 3419419 - 3419771 | 11942.4 |
| is1 family transposase | D9K54_17030 | Not Available | Negative | 3419772 - 3419850 | 2485.91 |
| autotransporter outer membrane beta-barrel domain-containing protein | D9K54_17040 | Not Available | Positive | 3424398 - 3425795 | 50565.8 |
| transcriptional regulator | D9K54_17045 | Not Available | Positive | 3426004 - 3426270 | 10047.9 |
| type ii toxin-antitoxin system hipa family toxin | D9K54_17050 | Not Available | Positive | 3426270 - 3427592 | 49424.9 |
| fimbrial chaperone protein fimc | D9K54_17065 | Not Available | Positive | 3428657 - 3429367 | 26111.7 |
| type ii toxin-antitoxin system rele/pare family toxin | D9K54_17080 | Not Available | Positive | 3430264 - 3430545 | 10931.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





