Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | D9K54_16880 | Not Available | Negative | 3397032 - 3398750 | 63684.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | D9K54_16885 | Not Available | Negative | 3398861 - 3399568 | 26423.9 |
| rcs stress response system protein rcsf | D9K54_16890 | Not Available | Negative | 3399565 - 3399969 | 14164.3 |
| methionine abc transporter substrate-binding protein metq | D9K54_16895 | Not Available | Negative | 3400087 - 3400902 | 29419.2 |
| methionine abc transporter | D9K54_16900 | Not Available | Negative | 3400942 - 3401595 | 23257.6 |
| d-methionine abc transporter, atp-binding protein | D9K54_16905 | Not Available | Negative | 3401588 - 3402619 | 37816.7 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | D9K54_16910 | Not Available | Positive | 3402807 - 3403382 | 21295.4 |
| is1 family transposase | D9K54_16915 | Not Available | Negative | 3403724 - 3403942 | 7839.42 |
| mrna interferase pemk | D9K54_16920 | Not Available | Negative | 3404191 - 3404523 | 11881.5 |
| antitoxin pemi | D9K54_16925 | Not Available | Negative | 3404525 - 3404782 | 9333.16 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





