Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyl transferase subunit alpha | D9K54_16830 | Not Available | Positive | 3388597 - 3389556 | 35243.6 |
| lysine decarboxylase ldcc | D9K54_16835 | Not Available | Positive | 3389655 - 3391796 | 80594.9 |
| voc family protein | D9K54_16840 | Not Available | Positive | 3391853 - 3392242 | 14707.4 |
| trna lysidine(34) synthetase tils | D9K54_16845 | Not Available | Positive | 3392307 - 3393605 | 48129.9 |
| rho-binding antiterminator | D9K54_16850 | Not Available | Negative | 3393654 - 3393914 | 9698.45 |
| yaep family protein | D9K54_16855 | Not Available | Negative | 3393901 - 3394101 | 7214.59 |
| yaeq family protein | D9K54_16860 | Not Available | Positive | 3394267 - 3394812 | 20849.7 |
| peptidyl-trna hydrolase arfb | D9K54_16865 | Not Available | Positive | 3394809 - 3395231 | 15591.9 |
| envelope stress response activation lipoprotein nlpe | D9K54_16870 | Not Available | Positive | 3395245 - 3395955 | 25805.7 |
| yaef family permuted papain-like enzyme | D9K54_16875 | Not Available | Negative | 3396155 - 3396979 | 29958.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





