Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein cspg | D9K54_00700 | Not Available | Negative | 141712 - 141924 | 7781.14 |
| cold-shock protein csph | D9K54_00705 | Not Available | Positive | 142210 - 142422 | 7720.48 |
| threonine-rich inner membrane protein gfca | D9K54_00710 | Not Available | Positive | 142864 - 143169 | 9447.98 |
| yjbf family lipoprotein | D9K54_00715 | Not Available | Positive | 143276 - 143920 | 24249.9 |
| hypothetical protein | D9K54_00720 | Not Available | Positive | 143917 - 144663 | 27278.6 |
| yjbh domain-containing protein | D9K54_00725 | Not Available | Positive | 144663 - 146759 | 78675.2 |
| polysaccharide export protein | D9K54_00730 | Not Available | Positive | 146805 - 147944 | 41743.2 |
| protein-tyrosine-phosphatase | D9K54_00735 | Not Available | Positive | 147932 - 148378 | 16386.9 |
| tyrosine-protein kinase etk | D9K54_00740 | Not Available | Positive | 148398 - 150578 | 81264.5 |
| phytase appa | D9K54_00745 | Not Available | Negative | 150698 - 152002 | 47358.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





