Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde-2,1-aminomutase | D9K54_16680 | Not Available | Negative | 3354555 - 3355835 | 45254.7 |
| h(+)/cl(-) exchange transporter clca | D9K54_16685 | Not Available | Positive | 3356060 - 3357481 | 50366.0 |
| hypothetical protein | D9K54_16690 | Not Available | Positive | 3357505 - 3357570 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | D9K54_16695 | Not Available | Positive | 3357563 - 3357907 | 12101.2 |
| tric cation channel family protein | D9K54_16700 | Not Available | Negative | 3357954 - 3358577 | 22129.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | D9K54_16705 | Not Available | Negative | 3358615 - 3359415 | 29390.5 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | D9K54_16710 | Not Available | Negative | 3359408 - 3360106 | 24367.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | D9K54_16715 | Not Available | Positive | 3360190 - 3361707 | 59358.2 |
| periplasmic serine endoprotease degp | D9K54_16720 | Not Available | Positive | 3361837 - 3363261 | 49357.3 |
| cdar family transcriptional regulator | D9K54_16725 | Not Available | Positive | 3363416 - 3364573 | 43660.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





