Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | D9K54_16580 | Not Available | Negative | 3330087 - 3330878 | 27947.9 |
| fimbrial protein | D9K54_16585 | Not Available | Negative | 3331014 - 3332126 | 40261.0 |
| fimbrial protein | D9K54_16590 | Not Available | Negative | 3332138 - 3332728 | 21186.8 |
| fimbrial protein | D9K54_16595 | Not Available | Negative | 3332749 - 3333360 | 21156.0 |
| fimbrial protein | D9K54_16600 | Not Available | Negative | 3333375 - 3333923 | 18817.2 |
| outer membrane usher protein | D9K54_16605 | Not Available | Negative | 3333937 - 3336537 | 94617.0 |
| fimbrial chaperone | D9K54_16610 | Not Available | Negative | 3336579 - 3337304 | 26258.4 |
| fimbrial protein | D9K54_16615 | Not Available | Negative | 3337391 - 3337987 | 20366.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | D9K54_16620 | Not Available | Negative | 3338329 - 3338808 | 17787.5 |
| polynucleotide adenylyltransferase pcnb | D9K54_16625 | Not Available | Negative | 3338805 - 3340223 | 54659.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





