Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine phosphoribosyltransferase | D9K54_16530 | Not Available | Positive | 3322441 - 3322977 | 20116.4 |
| carbonate dehydratase | D9K54_16535 | Not Available | Negative | 3323018 - 3323680 | 25098.2 |
| abc transporter atp-binding protein | D9K54_16540 | Not Available | Positive | 3323789 - 3324715 | 34649.2 |
| inner membrane transport permease yadh | D9K54_16545 | Not Available | Positive | 3324712 - 3325482 | 28517.9 |
| pts sugar transporter subunit iia | D9K54_16550 | Not Available | Positive | 3325587 - 3326027 | 16541.0 |
| polysaccharide deacetylase family protein | D9K54_16555 | Not Available | Positive | 3326091 - 3327320 | 46359.8 |
| aspartate 1-decarboxylase | D9K54_16560 | Not Available | Negative | 3327324 - 3327704 | 13834.5 |
| rpn family recombination-promoting nuclease/putative transposase | D9K54_16565 | Not Available | Positive | 3327978 - 3328850 | 33729.7 |
| hypothetical protein | D9K54_16570 | Not Available | Positive | 3328919 - 3329128 | 8236.79 |
| pantoate--beta-alanine ligase | D9K54_16575 | Not Available | Negative | 3329224 - 3330075 | 31597.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





