Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | D9K54_16480 | Not Available | Positive | 3306829 - 3308721 | 66101.7 |
| dihydrolipoyl dehydrogenase | D9K54_16485 | Not Available | Positive | 3308929 - 3310353 | 50691.4 |
| duf3300 domain-containing protein | D9K54_16490 | Not Available | Negative | 3310424 - 3312271 | 68975.3 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | D9K54_16495 | Not Available | Positive | 3312626 - 3315223 | 93521.5 |
| upf0231 family protein | D9K54_16500 | Not Available | Positive | 3315398 - 3315760 | 13930.3 |
| adenosylmethionine decarboxylase | D9K54_16505 | Not Available | Negative | 3315798 - 3316592 | 30400.3 |
| polyamine aminopropyltransferase | D9K54_16510 | Not Available | Negative | 3316608 - 3317474 | 32323.2 |
| hypothetical protein | D9K54_16515 | Not Available | Negative | 3317580 - 3317927 | 12854.4 |
| multicopper oxidase cueo | D9K54_16520 | Not Available | Positive | 3318093 - 3319643 | 56614.6 |
| pyrroloquinoline quinone-dependent dehydrogenase | D9K54_16525 | Not Available | Negative | 3319845 - 3322235 | 86754.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





