Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsq | D9K54_16380 | Not Available | Positive | 3284290 - 3285120 | 31421.6 |
| cell division protein ftsa | D9K54_16385 | Not Available | Positive | 3285117 - 3286379 | 45332.7 |
| cell division protein ftsz | D9K54_16390 | Not Available | Positive | 3286440 - 3287591 | 40326.4 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | D9K54_16395 | Not Available | Positive | 3287692 - 3288609 | 33957.8 |
| seca regulator secm | D9K54_16400 | Not Available | Positive | 3288840 - 3289352 | 18880.6 |
| preprotein translocase subunit seca | D9K54_16405 | Not Available | Positive | 3289414 - 3292119 | 102031.0 |
| 8-oxo-dgtp diphosphatase mutt | D9K54_16410 | Not Available | Positive | 3292179 - 3292568 | 14858.8 |
| dna gyrase inhibitor yacg | D9K54_16415 | Not Available | Negative | 3292783 - 3292980 | 7306.49 |
| cell division protein zapd | D9K54_16420 | Not Available | Negative | 3292990 - 3293733 | 28293.3 |
| dephospho-coa kinase | D9K54_16425 | Not Available | Negative | 3293733 - 3294353 | 22623.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





