Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | D9K54_16280 | Not Available | Negative | 3262002 - 3263093 | 39519.3 |
| 2-isopropylmalate synthase | D9K54_16285 | Not Available | Negative | 3263093 - 3264664 | 57319.2 |
| leu operon leader peptide | D9K54_16290 | Not Available | Negative | 3264757 - 3264843 | 3146.0 |
| transcriptional regulator leuo | D9K54_16295 | Not Available | Positive | 3265503 - 3266447 | 35686.7 |
| acetolactate synthase 3 large subunit | D9K54_16300 | Not Available | Positive | 3266765 - 3268489 | 63002.1 |
| acetolactate synthase small subunit | D9K54_16305 | Not Available | Positive | 3268492 - 3268983 | 18035.9 |
| frur/shl operon leader peptide | D9K54_16310 | Not Available | Positive | 3268995 - 3269081 | 3290.94 |
| catabolite repressor/activator | D9K54_16315 | Not Available | Positive | 3269163 - 3270167 | 38001.5 |
| transcriptional regulator mraz | D9K54_16320 | Not Available | Positive | 3270769 - 3271227 | 17361.0 |
| ribosomal rna small subunit methyltransferase h | D9K54_16325 | Not Available | Positive | 3271229 - 3272170 | 34879.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





