Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain L889 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1386626 bp
Thymine Count
1382639 bp
Guanine Count
1409391 bp
Cytosine Count
1412408 bp
Genome Length
5605530 bp
Protein-coding Genes
5216 genes
Non-Coding Genes
253 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine-n-oxide reductase tora | D9K54_00655 | Not Available | Negative | 131583 - 134129 | 94530.2 |
| pentaheme c-type cytochrome torc | D9K54_00660 | Not Available | Negative | 134129 - 135301 | 43658.9 |
| two-component system response regulator torr | D9K54_00665 | Not Available | Positive | 135431 - 136123 | 26270.9 |
| tmao reductase system periplasmic protein tort | D9K54_00670 | Not Available | Negative | 136096 - 137124 | 37924.0 |
| tmao reductase system sensor histidine kinase/response regulator tors | D9K54_00675 | Not Available | Positive | 137207 - 139951 | 100895.0 |
| 4fe-4s binding protein | D9K54_00680 | Not Available | Positive | 140023 - 141096 | 40176.4 |
| protein gnsa | D9K54_00685 | Not Available | Negative | 141145 - 141318 | 6575.99 |
| protein ymce | D9K54_00690 | Not Available | Negative | 141308 - 141538 | 8727.65 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 141651 - 141758 | Not Available |
| cold-shock protein | D9K54_00695 | Not Available | Negative | 141513 - 141701 | 7104.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





